YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7008131
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFVVMYGLNG LAFLMYSVCQ LVVSIFVLSN FWMTGSTILG VIFITTGQVL MYTISYEICE  60
   61 GVKHYLDGLF IGSICNVFAL MMIYKTWDIS TDEDLEFSVS ISVDGDIMYN SNLKL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.68
Transmembrane Helix	7	28	0.86
Non-Cytoplasmic	29	34	0.49
Transmembrane Helix	35	56	0.84
Cytoplasmic	57	64	0.64
Transmembrane Helix	65	87	0.81
Non-Cytoplasmic	88	115	0.67