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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16183606
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLADQIDDY ICSFEGLGDL TMDSLAIFIF LWAVLALFSV WLIKLLYHKY LNKDKSASAA  60
   61 NSRQTSVAPT SGSPTSVAGK TEKRLSEPRD LLATKSKVEG LDLSKPLAGA SGGRGRSSAS 120
  121 PLNTAGAAAG GPRRRVVRQS STGPENRKKR YVPPPSNVVG PETSSVTWTS QVFRWLYSDL 180
  181 VIVNELLMSW VIAINDTLRK SVEEHGVAVE VVRVLPDSPA PGLNNIFCNC DENNPADMLI 240
  241 TFDCDAMPVL QVKTFRQKSG KVETSHYKVT VSRFRARMAI PMNYNSLKGE MRVEGYPDVR 300
  301 IAMNSVGAIK AMDQDEQQLQ TVISDILTTA LRDTIYPVDF SIYSTCPRAE VEPLDLPHNM 360
  361 EQHMGGVGLR DSQHMVSGRR LLVKIVKGDG IRDAQNPYVV IEMDEPAQKN QTGTQRGGKP 420
  421 FWDEHFLFEL SPQSAEILFE VYDHPVIASD PPKFLGLGLV GIDELAVGPA STQLLQLQPR 480
  481 PYETQPVSGA ITVDFVFIEG AEIPAGARPQ RLKEALRLST PAINEHIRNG ADLADAAVRA 540
  541 LQDGALSSSG SGGQPSKSTL IIHSVQRNSS SPNAFKVELN RDGQIEVTDT ATELDQAVAQ 600
  601 AFERAANEAQ TELELELAKE EKSSQLGEPL IDSGNGTVNE ESTAEFGQPN AASSPNGSSY 660
  661 HNNYSLNGNG NSNGAGSGGY NSLPRNGGAQ QLAQQSGLLE GHDVVDDRGR SKKRNFFGTL 720
  721 KKRLSRSKTR TLSADQPNNN SHKSLSATNS NTTTATGFPR TATGTLNGDS SRSLSVDRAT 780
  781 LSKSNSLGPR MGIGHSITDH SRRSSISESS AISGFSSASN KTYVHEASTL VLETIENGIK 840
  841 RHFIVPLAIA QRPRWRRKGT KLHIYNDHTF IAKHLSGSGL QCSICMKSIP RRPGKQGYEC 900
  901 RDCQLICHKQ CHIRAPQACP NPTVLSMELT SFPVLTERDI NLVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle