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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LMPB_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHIGRIVSF PIGLVLIAVG IIIFVVVNRT IKDEFKKAAV VIPDNGAEEI VDPWVRFIGN  60
   61 EGDPNNVRTY TFMAYNLTNP IETMQGHLPK YQEVGPYSYN YIYERINANL YEDDEKLSFK 120
  121 LWKRYFPIVA DGYRDPTKDT IYHFNLVYGA AVKQAGSEVA LSVALTAAAM GKIITGLTDP 180
  181 SFKVKAGFAA APTVTAGAFS NLLTAAGNDP ATACGLWQTS TSSSTPLVPF SVPIIAGSPS 240
  241 DISQAQCQAL FDPSNKFSLT DPTNVGVYLL NPAGSKAALL ASPFGLTSVQ ADLIMKYQLA 300
  301 LTSTFVPTTL VSRFAECSDP KTCTNNPLYF GLLQWAKNPS LLGQSVFAIP NSGVPAAPEF 360
  361 GIYTSSELSL TKAGSLFLNT STINLITPTS IGTILVYGQK LKADPTSIPP ALYAPFSSGE 420
  421 FDAIVKYTGY IMAAFVDGDI IKNQIFKDYQ GGPIVKHTVH DFLFNSTDPL LKLMYPDTPS 480
  481 AWVSSPLDNI QDVKVANATL HTDEIYTGVG DIDLVSSPIT FEGEEELNYN KKIKVSGSFA 540
  541 EQLPPSYLSK DPEAPVNVFT DEFARSLSFR KEVGGNFGGI PYYRYRINES NWEINPDYFQ 600
  601 TIPYLLNLTS IKSGAPAYLS RPRLKGIDVG YYYKAGITDL INDDEDLDVF ADYEPRSGKA 660
  661 IHGRYSLQVN TYIQGSDGTN STLYNKYSAF RSDVVHPMFW GVNIIAATQE QIDILTKAYK 720
  721 VDSFRYAITV ILIVVGGFLS LISGGLFVLD KIIDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle