YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6934300
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPEDMIEAAK STGIREMFVH RYLDLQGSAW PLGFLMKYCA MLRNRMLADP SFLFKVGTEI  60
   61 VIDSCCATFA EVQKRGKDFW SEFELYAADL LVGIVVDIAL VGMLAPYARI GQPSISRGLL 120
  121 GNIQQACSAL PSSVFEAERP GCRFSLKQRV ATYFYKGVLY GSVGFGCGLI GQGIANLIMT 180
  181 AKRSIKKSEE DIPVPPLVQS AVLWGVFLAV SSNTRYQIIN GLESLVEKSP LAKKVPPVAM 240
  241 AFTVGVRFAN NIYGGMQFID WAKLSGVQ

Type	Start	End	Confidence
Cytoplasmic	1	84	0.74
Transmembrane Helix	85	108	0.83
Non-Cytoplasmic	109	157	0.70
Transmembrane Helix	158	179	0.84
Cytoplasmic	180	268	0.55