YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6002934
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILVTGAAG FIGSHFVRSL LADTYSGWEG ARVTALDKLT YAGNRNNLPP SNPRLEFVRG  60
   61 DVCDRALLRE LLPGHHAVVH FAAESHVDRS LEGAGEFFRT NVLGTQTLLD AVLDSGVERV 120
  121 VHVSTDEVYG SIEQGSWTED WPLQPNSPYA ASKACSDLVA RAYCAPTEVD LSITRCSNNY 180
  181 GPHQHPEKVI PRFVTNLLEG RQVPLYGDGR NVREWLHVED HCRGIHLVLN KGQAGEIYNI 240
  241 GGGNEYTNLA LTEKLLELTG AGPEMIRRVP DRKAHDLRYS IDESKIREKL GYAPRISFEQ 300
  301 GLSDTVAWYR DNPDWWKSIE HGGDSAAA

Type	Start	End	Confidence
Signal Peptide	1	19	0.69
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	328	0.99