YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33468717, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFAALFSV VMLFTVVPAW TEKHSLYYIY TALSRPVHLP GIYEFTAMGL LDDRQIDYYN  60
   61 SQEQKKIPKQ HWMKEKMQED YWEKGTQSRK SKEQWFNVNL KILMERMRHN NNSDVHVLQW 120
  121 RHGCEIDSQG NDVRFSKGID EYSYDGRNFL AFDDADSQWV APVEEALPTK RKWDNVPILN 180
  181 QYTKGYLEKE CVDWLNKFRE YGDQELREGS PPDVHVFAKK IISGKAKLKL TCMVTGFYPK 240
  241 DVILTIRKYR TALSDNEVES SGVRPNPDGT FQLRKSTNIY EKAEYDCYVA HRTLKEPIIK 300
  301 KWGNQSIQKK HLVKMGSART ALQELP

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	326	0.99