YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6739575
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLYKQTAGRS PALGLPCWCW GDSVCSLVDN RESGTMAEGD NRSSNLLAVE TASLEEQLQG  60
   61 WGEVMLMADK VLRWERAWFP PAIMGVVSLL FLIIYYLDPS VLSGVSCFVM FLCLADYLVP 120
  121 ILAPRIFGSN KWTTEQQQRF HEICSNLVKT RRRAVGWWKR LFSLKEEKPK MYFMTMIISL 180
  181 AAVAWVGQQV HNLLLTYLIV TFVLLLPGLN QHGIILKYIG MAKREINKLL KQKEKKNE

Type	Start	End	Confidence
Cytoplasmic	1	76	0.99
Transmembrane Helix	77	96	0.96
Non-Cytoplasmic	97	101	0.79
Transmembrane Helix	102	123	0.89
Cytoplasmic	124	168	0.96
Transmembrane Helix	169	188	0.91
Non-Cytoplasmic	189	193	0.81
Transmembrane Helix	194	216	0.89
Cytoplasmic	217	238	0.93