YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3450968
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDGSVLLTCD LTDKYIQWFK DSPNTLVQNT SEKTFNIGSN AKDPQGIYWC GGSEYTSKPF  60
   61 QVYYRMCQNC IELNAATVSG FIFAEIISIF FLAVGVYFIA GQDGVRQSRA SDKQTLLPND 120
  121 QLYQPLKDRE DDQYSRLQGN HQRKK

Type	Start	End	Confidence
Cytoplasmic	1	77	0.68
Transmembrane Helix	78	101	0.84
Non-Cytoplasmic	102	145	0.73