YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6724090
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQRNKGLSS NNSGQPSIAL PSTSTMAPTT SPPPKLAKFK SSSLDHEIYT ANRRGTIATA  60
   61 SSDWKALRGG VGGGAGGPGS VPNPSNGRSL HAGGPMTRAA STSSLASSTR TMTNYQEYKM 120
  121 DIINQGKCLC GQYIRARLRR AGVLNRKVTQ RLRNILDPGS SHVVYEVFPA LNSMGEELER 180
  181 MHPRVYTNIS RQLSRAPFGE LEDSDMAPML LNLVAKDLFR SSITWGKIIS IFAVCGGFAV 240
  241 DCVRQGHFDY LQCLIDGLAE IIEDDLVYWL IDNGGWLGLS RHIRPRVGEF TFLGWLTLFV 300
  301 TISAGAYMVS NVCRRIGGQL YSLLF

Type	Start	End	Confidence
Cytoplasmic	1	222	0.58
Transmembrane Helix	223	240	0.40
Non-Cytoplasmic	241	290	0.62
Transmembrane Helix	291	313	0.84
Cytoplasmic	314	325	0.59