YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13195570
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTFAAFCY IAAIILTAFL IFFAIWQIIA FDELKTDYKN PIDQCNSLNP LVLPEYAIHI  60
   61 FFTLLFLWGG EWVTVALNMP LIGYNVWRYL HRPVMSAPGL YDPTTVMNAD VLTYCMREGW 120
  121 CKLAFYLISF FYYLYRMIYV LVTY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.88
Transmembrane Helix	7	30	0.90
Non-Cytoplasmic	31	57	0.91
Transmembrane Helix	58	82	0.81
Cytoplasmic	83	122	0.86
Transmembrane Helix	123	140	0.73
Non-Cytoplasmic	141	144	0.55