YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6714875
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTILFMLTV SISLSTILTT LNFWLAQTNP DSEKLSPYEC GFDPLGTARL PFSIRFFLVA  60
   61 ILFLLFDLEI ALLLPLPWAT QLQSPLTTLT WAMTIIILLT LGLVYEWTQG GLEWAE

Type	Start	End	Confidence
Cytoplasmic	1	4	0.56
Transmembrane Helix	5	26	0.83
Non-Cytoplasmic	27	51	0.51
Transmembrane Helix	52	76	0.83
Cytoplasmic	77	85	0.45
Transmembrane Helix	86	108	0.87
Non-Cytoplasmic	109	116	0.52