YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222421686, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPKIALTI AGTDPTGGAG VMADLKSFHA CGVYGMAAIT SIVAQNTKGV QHIHNLDITW  60
   61 LKEQLDSIFD DELPQAIKTG MIATKEMMEL IRSYLEKYPD IPYVIDPVML AKSGDSLMDD 120
  121 AGKHALQEIL LPLADVATPN LPEAEEIVGF KLDTEEAIKK AGDIFINEIG SKGVVIKGGH 180
  181 IEDKNIAKDY LFTKDGLEVF ESERYDTKHT HGTGCTFSAV ITAELAKGKT IYEAVKKAKD 240
  241 FIALSIKYTP EIGQGRGPVN HFAYMKKVGL DDE

Type	Start	End	Confidence
Signal Peptide	1	23	0.87
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	273	0.99