YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16076697
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAVVAVVLA SMVGGALCAM GDKPGPNITA TYGDKWLDAK ATFYGSDPRG AAPDDHGGAC  60
   61 GYKDVDKAPF DSMTGCGNEP IFKDGLGCGS CYEIKCKEPA ECSGEPVLIK ITDKNYEHIA 120
  121 AYHFDLSGKA FGAMAKKGEE DKLRKAGELM LQFRRVKCEY PSDTKIAFHV EKGSNPNYLA 180
  181 LLVKYAAGDG NIVSVDIKSK GSDEFLPMKQ SWGAIWRIDP PKPLKGPFTI RLTSESGGHV 240
  241 EQEDVIPEDW KPDTVYKSKI QF

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	262	0.99