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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6691135
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCICPDGYV SRGKGGCKPT PGIKEVGGCI SDSDCPTDKS CLNSVCRDPC NCGLNAECRI  60
   61 KDHKPVCTCR QGFEGNPEFE CSKIECSINS DCPGTHVCRN QLCIPACQGE QCGSNAQCLA 120
  121 IEHRAVCECI PGHGGNARIA CTPLGCRSDD ECPTDKACVN GKCNDPCTTT ALCAQDELCK 180
  181 VYHHRPQCAC PPGTVPGKNG CESERHIPIC ISDADCPSQK ACLRGECVNP CNATQPCGVN 240
  241 AFCSVRDTLP VRTMICECLE GYTGNPAVQC DKRSLCVIEK GFVRDVDGQC VCPPGTALDI 300
  301 YEYCTPCREE QGFRIDESGH CVCALERGMV IDERGRCTCP IDLGYRLTPR GECQPEEPPE 360
  361 CTSNDQCADN RFCNLDTKTC EDPCLTKVCG VNAFCNAVNH RAQCQCITGY TGNPDLHCNH 420
  421 TNFRTDFPRP DMVVSCLADG VQVEIHITEP GFNGVLYVKG HSKDEECRRV VNLAGETVPR 480
  481 TEIFRVHFGS CGMQAVKDVA SFVLVIQKHP KLVTYKAQAY NIKCVYQTGE KNVTLGFNVS 540
  541 MLTTAGTIAN TGPPPICQMR IITNEGEEIN SAEIGDNLKL QVDVEPATIY GGFARSCIAK 600
  601 TMEDNVQNEY LVTDENGCAT DTSIFGNWEY NPDTNSLLAS FNAFKFPSSD NIRFQCNIRV 660
  661 CFGRCQPVNC GGYNAFGRRR RSIADNSTDA TAIATNSGVE GQLREEITIS SNAILTFEKR 720
  721 SGQGLNDANI KPAAQRVEDI CVSMVGLIIA LVITALLTLV AVAVAVSCWL MAYRRRPKTI 780
  781 APLPHPPEFP NPLFSNPDAV PEPTPDYIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle