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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6689892
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSGKQIDF SKRKKKIYLA IVASVLLVAA VIGVVAGVKS RSNNSDDDAD IMAISSSAHA  60
   61 IVKSACSNTL HPELCYSAIV NVTDFSKKVT SQKDVIELSL NITVKAVRRN YYAVKELIKT 120
  121 RKGLTPREKV ALHDCLETMD ETLDELHTAV ADLELYPNKK SLKEHAEDLK TLISSAITNQ 180
  181 ETCLDGFSHD EADKKVRKVL LKGQKHVEKM CSNALAMICN MTNTDIANEM KLSGSRKLVE 240
  241 DNGEWPEWLS AGDRRLLQSS TVTPDVVVAA DGSGDYKTVS EAVAKAPEKS SKRYVIRIKA 300
  301 GVYRENVDVP KKKTNIMFMG DGRSNTIITA SRNVQDGSTT FHSATVAAVG EKFLARDITF 360
  361 QNTAGASKHQ AVALRVGSDL SAFYKCDILA YQDTLYVHSN RQFFVQCLVA GTVDFIFGNG 420
  421 AAVLQDCDIH ARRPGSGQKN MVTAQGRTDP NQNTGIVIQK CRIGATSDLR PVQKSFPTYL 480
  481 GRPWKEYSRT VIMQSSITDV IQPAGWHEWN GNFALNTLFY GEYANTGAGA ATSGRVKWKG 540
  541 HKVITSSTEA QAYTPGSFIA GGSWLSSTGF PFSLGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle