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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PHO11_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFTKQFEG QLVPEWKDAF VDYSQLKKDL KKIHLFTNGV EKKHTETSLI KTVKSSLGRL  60
   61 SIFGNKGREQ SRVIQVHKKL ASSGSNNDVY ETELLEKIAD DTDAAKEFFA CLDMQLNKVN 120
  121 QFYKTKEKEF LERGECLKKQ MDILIELKDA FKQKQANGES TQESKEDDSI SCTISCEYDS 180
  181 VRGRTEEMQL QVSCLDNLED NGEEALESLG SEEPIKANNE DSKLTTVSSR VFSCQGKNVK 240
  241 IKIPLTNPSR TFSAISYLIN QSSSKKNGPD GGNKLQISKK KLSHAEKMIK GALTELFKGL 300
  301 NYLKTYRNLN ILAFMNILKK FDKVTGKQIL PIYLKVVESS YFNISDKVMI LSDEVEEWFI 360
  361 KHLAGENRRK AMKYLKPHHR KESHSVTFFI GLFTGCFVAL LAGYIIVAHL TGMYRQHSAN 420
  421 TFYMETAYPV LSMFGLLFLH LFLYGCNIFM WRKARINYSF IFELGSKNEL KYRDVFLICT 480
  481 ASMSAIAGVM FVHLSLLEKG YSFRQVQVIP GLLLLGFLLI LICPLNIFYK SSRYRLISVI 540
  541 RNIVFSPLYK VVMLDFFMAD QLCSQVPMLR NLEYIACYYI TGSYATQDYE YCMRVKYYRD 600
  601 LAYAVSFLPY YWRAMQCARR WFDEGETSHL VNLGKYVSAM LAAGTKVAYE KERSLGWLCL 660
  661 VVAMSSVATI YQLYWDFVKD WGLLQHNSNN PWLRNQLMLR QKSIYYFSMV LNLVLRLAWL 720
  721 QTVLHSSFEH VDYRVTGLFL AALEVIRRGQ WNFYRLENEH LNNAGKFRAV KTVPLPFREV 780
  781 DEED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle