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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6653584
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAMLVTCL PDPSSSFRED APRPPVPGEE GETPPCHHGG QGPGHQTHVC LFQHQAERRW  60
   61 VGEPEGRASP DSPLTRWTKS LHSLLGDQDG AYLFRTFLER EKCVDTLDFW FACNGFRQMN 120
  121 LKDTKTLRVA KAIYKRYIEN NSIVSKQLKP ATKTYIRDGI KKQQIDSIMF DQAQTEIQSV 180
  181 MEENAYQMFL TSDIYLEYVR SGGENTAYMS NGGLGSLKVV CGYLPTLNEE EEWTCADFKC 240
  241 KLSPTVVGLS SKTLRATASV RSTETVDSGY RSFKRSDPVN PYHIGSGYVF APATSANDSE 300
  301 ISSDALTDDS MSMTDSSVDG IPPYRVGSKK QLQREMHRSV KANGRVSLPH FPRTHRLPKE 360
  361 MTPVEPATFA AELISRLEKL KLELESRHSL EERLQQIRED EEREGSELTL NSREGAPTQH 420
  421 PLSLLPSGSY EEDPQTILDD HLSRVLKTPG CQSPGVGRYS PRSRSPDHHH HHHSQYHSLL 480
  481 PPGGKLPPAA ASPGACPLLG GKGFVTKQTT KHVHHHYIHH HAVPKTKEEI EAEATQRVHC 540
  541 FCPGGSEYYC YSKCKSHSKA PETMPSEQFG AQSTKKAYPL ESARSSPGER ASRHHLWGGN 600
  601 SGHPRTTPRA HLFTQDPAMP SLTPPNTLAH LEEACRRLAE VSKPPKQRCC VASQQRDRNH 660
  661 SATVQTGATP FSNPSLAPED HKEPKKLAGV HALQASELVV TYFFCGEEIP YRRMLKAQSL 720
  721 TLGHFKEQLS KKGNYRYYFK KASDEFACGA VFEEIWEDET VLPMYEGRIL GKVERID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle