YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YAB2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDFSSERV CYVHCSFCTT ILAVSVPYAS LFTLVTVRCG HCTNLLSLNI GVSLHQTSAP  60
   61 PIHQDLQPHR QHTTSLVTRK DCASSSRSTN NLSENIDREA PRMPPIRPPE KRQRVPSAYN 120
  121 RFIKEEIQRI KACNPEISHR EAFSTAAKNW AHFPHIHFGL KLDGNKKGKQ LDQSVAGQKS 180
  181 NGYY

Type	Start	End	Confidence
Cytoplasmic	1	9	0.49
Transmembrane Helix	10	29	0.52
Non-Cytoplasmic	30	184	0.90