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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15808083
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMAPRTLI LLLSGALALT QTWAGSHSMR YFYTSVSRPG RGEPRFIAVG YVDDTQFVRF  60
   61 DSDAASQRME PRTPWIEQEG PEYWDRNTRN VKAHAQTGRV NLGTLRGYYN QSDGGSHTIQ 120
  121 IMYGCDVGPD GRFLRGYRQD AYXGKDYIAL NEDLRSWTAA DMAAQITQRK WEAAGAAEQR 180
  181 RAYLEGLCVE SLRRYLENGK ETLQRTDAPK THMTHHRISD HEATLRCWAL GFYPAEITLT 240
  241 WQRDGEDQTQ DTELVETRPA GDGTFQKWAA VVVPSGKEQR YTCLVQHEGL PEPLTLRWEP 300
  301 SSQPTIPIVG IVAGLVLLGA VITGAVVAAV MWRRRSSDRK GGSYSQAASN DSAQGSDVSL 360
  361 TACKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle