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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15808079
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMAPRTLI LLLSGALALT QTWAGSHSMR YFFTSVSRPG RGEPRFITVG YVDDTQFVRF  60
   61 DSDAASQRME PRTPWMEQEG PEYWDRETRS AKARAQTDRM NLGTLRDYYN QSEDGSHTIQ 120
  121 IMYGCDVGPD GRFLHGYRQD AYDGKDYIAL NEDLRSWTAA DMAAQITQRK WEAAGVAEQQ 180
  181 RAYLEGTCVE WLRRYLENGK ETLQRTDAPK THMTHHRISD HEATLRCWAL GFYPAEITLT 240
  241 WQRDGEDQTQ DTELVETRPA GDGTFQKWAA VVVPSGKEQR YTCLVQHEGL PETLTLRWEP 300
  301 SSQPTIPIVG IVAGLVLLGA VITGAVVAAV MWRRRSSDRK GGSYSQAASN DSAQGSDVSL 360
  361 TACKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle