YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7804912
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRKVLLVI GFLVTWTYAT YYLLLRQTGI HTSRHQSLQA YKLNSQARDA NMQSHHLAKN  60
   61 VFEFVKLKYL EKQPPSVAST PQISIIAAEI SAELPEQHVA KSATARIPTK TYLANGEPVF 120
  121 PVVVFACNRV SVKKCIDNLV QYRPSVEQFP IIVSQDCGDE PTKEAILSYG KQVTLIEQPD 180
  181 LSDIMPKEKK FKGYYKIARH YGWALNTTFA VGFEFVIIVE DDLNVAPDFF EYFLGTHKLL 240
  241 KQDPSLWCVS AWNDNGKAAV VDAAQPELLY RTDFFPGLGW MLTKDLWAEL SVKWPKSFWD 300
  301 DWIRHPAQRK DRVCIRPEIS RTRTFGKIGV SNGLFFDKYL KHIKLSEDFV QFTKINMSYL 360
  361 LKDNYDNTFL RRVYTYPIVT YDELRRNLIR IEGPVRIQYT TREQYKRTTK MLGLMDDFKS 420
  421 GVPRTAYHGI VSFYYNKRRV HLAPNANWKG YELSWS

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	456	0.99