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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15778562
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVVLALTV ALVASQQINL VPEFTPGKTY VYNYEALLLG GLPHEGLARA GIKVNSKVHL  60
   61 SAVTENTFLM KLMDPLIYEY AGIWPKDPFV PATKLTSALA AQLQIPIKFE YANGVVGKVF 120
  121 APAGVSPTVL NLHRGILNIL QLNLKKTQNI YELQEAGAQG VCRTHYVISE DPKANHITVT 180
  181 KSKDLSHCQE RIVKDVRLAY TERCAECTER IKSLIETATY NYIMKPASAG VLITEATVEE 240
  241 VHQFSPFNEI HGAAQMEAKQ TLAFVEIEKT LVVPIKADYL ARGSLQYEFA TEILQTPIHL 300
  301 MKISDAPAQI IEVLKHLVAN NVAMVHEDAP LKFVQLIQLL RVSTLENIEA IWAQFKDKPA 360
  361 YRRWLLDALP SVGTPVIIKF IKEKFLAGEL TLPEFIQALV VALQMVTADL DTIQLTASLA 420
  421 MHEKIAKMPA LREVVMLGYG SMIARHCVAV PTCSAELLRP IHEIAAEATS KNDIREITLA 480
  481 LKVLGNAGHP ASLKPIMKLL PGLRTAASSL PLRVQVDAIL ALRNIAKKEP KLVQPVALQL 540
  541 VLDRALHPEV RMVACIVLFE SKPSVALVSS LAGALKTETN MHVVSFAYSH IKSLTRITAP 600
  601 DMAAVAGAAN VAIKLMSRKL DRLSFRFSRA LQLDYYHTPL MIGAAGSAYM INDAATILPR 660
  661 AVVAKARAYL AGAAADVLEI GVRTEGIQEA LLKSPAADES VDRITKIKRT LRALANWKDL 720
  721 PTDQPLASVY IKFLGQEVAF VKIDKTIIEE AIPIVTGPKP RELLKRALKA LQEGIAWQYA 780
  781 KPLLAAEARR ILPTAVGVPM ELSLYTAAVA AASVNVKATI TPPLPEEIET MTLEQLKKTD 840
  841 VQLQAEARPS IALQTFAVMG VNTALIQAAV MARGKIRTIA PVKVAARADI LKGNYKVEAL 900
  901 PVEVPEHIAT LSFETLAVVR NIEEPTAERT VPLVPELAVQ NSQTHSDYLS SENQDEVPVR 960
  961 APAPFDKTLC LAVPYIEIKG CVELHSHNAA FIRNDPLYYI IGQHSARATV ARAEGPAVER1020
 1021 LELEVQVGPR AAERLLKQIS LIDEETPEGK AFLLKLKEIL ETEDKNRPVS SESRSSSSSR1080
 1081 SNRSSSSSSS SSSSSSSSSS MSSSRVSKTA TIMEPFRKFH KDRYLAPHGA SKKVSSGSSA1140
 1141 SSFERIQKQA KFLGNAVPPV FAVIARAVRV DHKLLGYQLA AYFDKPTARV QIVVSSIAEN1200
 1201 DNLKICVDGA LLSKHKVTAK LAWGPECQQY AVTAKAEAGV LGEFPAARLE LEWERLPITV1260
 1261 TTYAKKMSKH IYMAAFQAGF RLERVMNSEK EIELTLALPN QRSLNVIFRI PEMTLSRMGI1320
 1321 HLPYAIPINP DGSLSIQIDE DILSWIQRHI KEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle