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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3169566
Protein type: Globular with Signal Peptide
Type Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTFDRRLW ILLFIISVQC TTYTQPQNIN AKSVQKPKPS ERREVISTSS SSSHSWPSIS  60
   61 AEPADEVVDH RGGGKPAKCA KNCQKAKAKW AKWRTQLKPH HQAHRAVQHK EARQRQRRET 120
  121 EEDELDAVLR APSSTSTSTA VATTVQATSS SSSATRSSVI NETKAKRPRS TLHLAPEDMQ 180
  181 PKPKEPVIII DDVEEFDSGT STSDLIARKS REEAEEEEDE GPLEPRVLPL RPVPPNPYEA 240
  241 EEMSVVYAEQ HSEIKLMCEV DLDIATSMWY KNGQVVHAMD RTARVTDYRF IKEANGALTI 300
  301 TNVMLEDDGK WQCEAENTRR YTENARPVKL VVLDRPKPPY LLIDSRRLDA SNLFVPVKEN 360
  361 SELNLACVSE GGNPRPTLTW EVLLSPGVDR HAQKVSAEVL ELEEIKGEKL DKDGYKINSG 420
  421 AKSEARLPAV YRAHHNARIL CVMEHPTLKI RQNASLLLDV QYTPSFAISR TPGFGYPLRE 480
  481 GIEVSLKCDV DSNPPSTPRW QKDDGDTPVP QTGDGFLNFT SIRREHSGWY KCTSRHLNFQ 540
  541 YSSIGYYLSV RFDSVDVTSE PDDQDVSVAA ASHNPNKGQL EVQLGGAVTL QCPQGSLGCW 600
  601 SHLDPISARL RGLGYGSSQP TGQFSLKDVM YQDAGMYKCV GQSPTNKKKL EVLQSVTVSV 660
  661 KGAPTVMALN ATPVAYPGSP LHLNVEFCAN PPAHAARWLH GDRVFTPGNQ YGTTVLAYAV 720
  721 KDLPTPFCKE ARLTYVSMHE RVPRTFYFIL STPGGVAEAI FNVNFTKRHR QLSNSIDDDE 780
  781 EEELNRPEQI HFPVFNGSPA DGRGWWAVVL ALLLVVATTN RH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle