YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6601333
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNGERMGTIK FTQFQDSREV KVGEYNAVAD TLEIINDTIR FQGSEPPKDK TIILEQLRKI  60
   61 SLPLYSILSA LTILGMIMAS AFLFFNIKNR NQKLIKMSSP YMNNLIILGG MLSYASIFLF 120
  121 GLDGSFVSEK TFETLCTVRT WILTVGYTTA FGA

Type	Start	End	Confidence
Non-Cytoplasmic	1	63	0.53
Transmembrane Helix	64	87	0.89
Cytoplasmic	88	100	0.51
Transmembrane Helix	101	122	0.87
Non-Cytoplasmic	123	153	0.48