YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2345100
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLLRLGAD GLAALGQSNA QPTDGPVPDT AEQVYISSLA LLKMLKHGRA GVPMEVMGLM  60
   61 LGEFVDDYTV TVVDVFAMPQ SGTGVSVEAV DPVFQAKMLD MLRQTGRPEM VVGWYHSHPG 120
  121 FGCWLSGVDM NTQQSFEALS DRAVAVVVDP IQSVKGKVVI DAFRLINPNL VIANQEPRQT 180
  181 TSNVGHLSKP TIQALIHGLN RHYYSLPINY RKNKWEIKML MNLNKRTWRD GLTLEDYNTH 240
  241 CSANHKTLQT MLDLVKSYHK SLEDEEKMTP EQLAIKNVGK MDPKRHLGEH VDELMTSNIT 300
  301 QSLGAMLHSV VFT

Type	Start	End	Confidence
Signal Peptide	1	20	0.91
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	313	0.99