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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6573196
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKKNKEH KINGKEKKKD IQSFKKDVET DNHKIPVDEL LERLKTDPNM GLSFVEAKLR  60
   61 LEINGPNILT PQPPTPKWIV FLKTMFGGFA ILLWAGSFLC FVGYLIQLQT QHEPPDDNLY 120
  121 LGIALTVLVI VTGLFTYFQV HKSSSIMDSF KNLVPQYATV VREGEINTVT SDEIVKGDIV 180
  181 EVKFGDRVPA DIRILEAHGL KVDNSSLTGE SEPQVRSTEF THENPLETKN LAFFSTNVLE 240
  241 GTCRGVVIAT GDSTVMGRIA NLAAGLDDVQ SPISREIQLF IRFITIFAII LGLSFFAISL 300
  301 TLGYEFIDAV VFLIGIIVAN VPEGLLVTVT VCLTLTAKRM ASKNCLVKNL EAVETLGSTS 360
  361 TICSDKTGTL TQNRMTVAHL WYDQIIVESD TTESFRGSHF KIEDKSFNAL FMCAALCNSA 420
  421 EFKGGQDDIP VFKKDVNGNA SEAALLKFTE TIFAGIGAFR QKHIKLTEIP FNSTEKYQVS 480
  481 VHEFNSSDGY FIVEMKGAPE RILDRCSTII IQGLSVELTP TLKLEFEEAY LEMGGMGERV 540
  541 LGFADLLLPM SKYPISYEFS ADPPNFPLEN LRFLGLISLI DPPRAAVPDA VAKCRSAGVR 600
  601 VIMVTGDHPI TAKAIARSVG IITTPTAEDI AKQRGVTVLD IDSRQATAIV VHGGELREMK 660
  661 AEELDAVIYY HNEIVFARTS PQQKLIIVEA CQRRGEIVAV SGDGVNDSPA LKRADIGVAM 720
  721 GISGSDVSKQ AADMILLDDN FASIVVGIEE GRIIFDNLKK SIAYTLTSNL PEIVPFLFFV 780
  781 IFDIPLARGT IAILCIDIGT DMLPAISLAY EKAESDIMAR MPRDPFEDRL VNKRLILMAY 840
  841 LQIGVIQTVA CFFTFFAIMA EHGFPPSRLK GIREDWDSKN VEDLEDGYGQ EWTYRERKVL 900
  901 EYTAGTGFFV SIVVTQVFDL LICKTRRNSI LQQGMGNHVL NFALVLEFII ACLLCYVPVF 960
  961 EKTLRMYSIK FIWWIYAFPF GLLIFFFDES RRFLIRRNPG GWVEQETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle