YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2257556
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLTELPTKST AQFSDETFTV QPRLKSTHSS IADNEDREVD SQVDENTRVV EEDVCFPMQE  60
   61 ESHVNKGIDF DELDNFAEEE LQKQRQNTDH FRSRQYSTCK PFEPHWNDLS PHDPNDPSSS 120
  121 LHSNNAEKAA EVPLRSSYYS GGRRSVTSMS DSPYRFSFFS SNQNETIHAS VLSDLLDDGA 180
  181 TSFRSLFCPE KGVWWLDCLD PTDIEMRVLS KAFSIHPLTT EDIRVQEARE KVELFGSYYF 240
  241 VCFRSFEQDP ELANYLEPLN MYIVVFREGL LTFHFSSATH PASVRRRARQ LRDYVHVSSD 300
  301 WLCYALIDDI TDAFVPLIRG IETETEAIED SVLVGRSEDS SDMLRRIGEC RKKTMGMFRL 360
  361 LYGKADVIKM LAKRCNEKWT IAPTGEIGLY LGDIQDHLVT MTSNLSQFEK ILSRTHSNYL 420
  421 AQLTSNSIEE NSRTNGALGK ITLIGTLLVP MNLVTGLFGM NVPVPGRDTN NLAWFFGILG 480
  481 VLLGSIAIGW IITMRYNAF

Type	Start	End	Confidence
Non-Cytoplasmic	1	436	0.50
Transmembrane Helix	437	462	0.79
Cytoplasmic	463	471	0.39
Transmembrane Helix	472	494	0.93
Non-Cytoplasmic	495	499	0.42