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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2257491
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKAVYIAG TPFQNLPWYP DGYSPLDFTL LDKHTGTLNQ WHEAIMKLHE RGFYVVVDFT  60
   61 ISTLSELSYF VNSSMSFANT SAPFSTKGYK MKYKHPEYHY TDFQLSNGSS YSCNAPTFWD 120
  121 VTGLPINNTE DLNSISEVMC LSGDFDHYGD VEAFGNHPPW WRQLSNFASV QDRLRDWDPI 180
  181 VAKKLKHLGC LAVKMLDIDG IRVDKATQIT ADFLGDWSAY IRQCAREIGK ENFFIPGEVT 240
  241 SGADFGSIYV GRGRQADQRP NNREIALQTG YNESKYFLRK ESDSALDSVS FHYSVYRTLT 300
  301 LLLGLQGELF AAFDLNRHDF AAMWNQMLIQ DDMINANTKK FDPRHLYGLT NQDIFRWPSI 360
  361 KDGRFKQLLG LFVVHLLMPG IPLIYYGEEQ NLKLLDNQAA NYIFGRQPIT SSIGWQKHGC 420
  421 YQIGTTQYTD LDFGPASEAC RDDWNSLDHL DPTSPTKHYI ARMNEIRSYF PQVRDGWDLK 480
  481 LIGKWTHEGT FPGNELYGES NPTTWGLWSM IRGPLAPYQK FSDQNDYIWL IFTNENTTKT 540
  541 YDMDCMRQVD NKFPPYPALL GPYSSGSTVK NLLYPYEEID LSTSTIDSPD IGNIGCIPHL 600
  601 TIDAYGSKIF VKKEDWIRPS LYLTKFLPGH DSRIYSATEV TSFKISLGFS EEVDCKDLFK 660
  661 RIGFNSRTLN SSFAPKILED SISCGYLDQP APQEYTNAPV TKWFFNATLD SVPNGMHELL 720
  721 LNEVKSTSNQ TMQSKIARLI FRVGNEENPL VYPNNATFSP SLLYKASNGD LYVNHTGAGA 780
  781 DKYRFSLNYG GTYSKWKTVS TPSEKLRKPT WNGTNLQKWD GDHLIVQYWS SIALSTAHVQ 840
  841 HGDTLNYSRQ FPNLFVQGAF NRFGYDGSMP SKMSYNLENR TWSYDLISTW PAELVLNVWG 900
  901 MNPDNNADQG WVYGDLDNDT IIDRVPPGSS RISNFIRFLD PPPKPYLSYK MYLNDFTRQL 960
  961 HYIPKGSWTV QIVAIVLLIL LPPLFGIFSV ALYSGAFSRV TIFNGSHNRG IKVAKQKIKS1020
 1021 IMSRIFPFSV HLPLDNSSEL LKQLPESEKR LNVLVATLEY DVPDLGIRVK IGGLGVMAQL1080
 1081 MGQHMEFQDM VWVVPIISGV EYPFDKLCTE PKIAVKIGDD EFVVNCYSYK SGNITYVFLQ1140
 1141 SEVFYKQSSK EPYPLKMDDL ASAIFYSVWN QCIAEVWKRF PLDIYHVNDY HGALAPLYLL1200
 1201 PEVIPVAVSL HNAEFQGLWP LRTSAELECV CSIFNIEKDI CTKYVQFGHV FNLLHSIISY1260
 1261 VRKHQGGYGV VAVSDKYSKQ TLSRYPIFWS LVHISGLPNP DPSDLKLLNH LTDDPVDVDF1320
 1321 VLEAKRKLLK KQTQEWANLD VDPSAQLLVF VGRWSHQKGI DLIADLAPKL LTEHNVQLIT1380
 1381 IGPVIDLHGQ FAAEKLEQIA KRFPTRVLCK PVFTAVPPFL FAGTDFALIP SRDEPFGLVA1440
 1441 VEFGRKGVLC IGSRTGGLGH MPGWWFQMAS PNTGHLLTQF ENAITKALHS NGELRARLRV1500
 1501 EALRQRFPVC IWKQKSENLL KSCIYVHEME TLKHASPTFK AYQFVVRICH YLTSKVKSIN1560
 1561 KDQVFNAFSP DVSERPPLFE VASCSNETDS VEKLTPELSV SPESDMHFKD GNSSKLEIVE1620
 1621 SKEIYASDSD ISNSTSEDIN KDECVSKDIE VDNFALNLQS QSYEGDSNDF GIREVPLSDA1680
 1681 NQSSQADSTS IDRYGPYSSQ KVNFSKYKDF VESRPTFFQS SVTFTDADGS TRKTFSKRLE1740
 1741 NLTTSNTLKS LSVDHFIRKH ERKYFNGLRK QEIDVKLKSR SDKEKSCTVS ESYKQIDCDT1800
 1801 YEATRLQKLL LHSIGGWPLY TIVLAIGQIL GASSYQLTLL SGESAQSTVS MYILLSIFSF1860
 1861 FSLFWWFLSR VVQARYILSL PFFFFGISFI LVAITHFFQK TTACSVIQHI AAYVYAISSS1920
 1921 TGSLYFAWNF GAEGGIATHH WILRACLVHG IQQIWSAILW SWGDLLSKKD LTQNVGPGIF1980
 1981 AGGLIASFIC FGLSYVTFAG LPAFYRQAPS IIPAFYRSLG KRNIVIWFFI SQILINYWLA2040
 2041 VPYGQAWRFF WNTSNTPLWS IIILLLIFFI VVWAVLLSVI KILSLNNVWF PVIFGLGLIC2100
 2101 PRWCLEFWSS SGLGINLPWA GKASALLTKS VWLLLALWDG IQGVGVGVML LQTLARDHVA2160
 2161 FTLMLAQVIS CITIMIAKPS LPVSDRVFPN LGAWNPSEGP GPCASPCFYI ALICQFVAVG2220
 2221 GLLYHYRKSQ LAL

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