YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15293447, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSKFLLLG SVASLASIPF VAAKCGETKE ENKPEPDKNP GGDKNPGENK TPGENKTPGE  60
   61 NKTPGENKTP GENKTPGENK TPGENKTPGE NKTPGENKTP GENKTPEENK KPEENKKPGG 120
  121 ESDSDINPRI PHDDPGSFDS APANPDQGTP ANPDQGTPAN PDQGTPANPD QGTPANSQQG 180
  181 AGTKPGQGAG TKPGQGAGTN SQQGAGTNSQ QGAGTNSQQG AGTKPGQGAG TKPGQGAGTN 240
  241 SQQGAGTNTQ QGAGTNTQQG AGTNSQQGAG TKPGQGAGTN SQQGAGTNSQ QGAGTNTQQG 300
  301 AGTNSQQGAG TNSQQGAGTN SQQGAGTNTQ QGAGTNSQQG AGTKPGQGA

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	349	0.99