YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6523819
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATGVAEE RLLAALAYLQ CAVGCAVFPR LRSAPNCILL AMFLVHYGHR CLIYPFLMRG  60
   61 GKPMPLLACT MAIMFCTCNG YLQSRYLSHC AVYADDWVTD PRFLIGFGLW LTGMLINIHS 120
  121 DHILRNLRKP GDTGYKIPRG GLFEYVTAAN YFGEIMEWCG YALASWSVQG AAFAFFTFCF 180
  181 LSGRAKEHHE WYLRKFEEYP KFRKIIIPFL F

Type	Start	End	Confidence
Cytoplasmic	1	36	0.54
Transmembrane Helix	37	57	0.61
Non-Cytoplasmic	58	63	0.50
Transmembrane Helix	64	83	0.90
Cytoplasmic	84	102	0.51
Transmembrane Helix	103	120	0.89
Non-Cytoplasmic	121	161	0.61
Transmembrane Helix	162	183	0.85
Cytoplasmic	184	211	0.89