YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15553353
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSAGLQMVG IALAVIGWIG VIVVCILPMW QVTAFIGQNI VTAQVTWEGI WMSCVVQSTG  60
   61 QMQCKVYDSM LALSSDLQAA RALCIISILV GVVGILLAAA GGKCTTCIXE ERAKAKVCVI 120
  121 SGAIFIVAGV LCLIPVCWTA NNIIRDFYNP MTNSAQKREL GASLFIGWGA SALLIIGGSL 180
  181 LCANCPPQDQ YKATYTARSG GTKGYV

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	30	0.93
Non-Cytoplasmic	31	78	0.88
Transmembrane Helix	79	101	0.92
Cytoplasmic	102	116	0.86
Transmembrane Helix	117	140	0.91
Non-Cytoplasmic	141	160	0.90
Transmembrane Helix	161	183	0.89
Cytoplasmic	184	206	0.90