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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15529153
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGNQKDSSE KPIWDRSSSS TSIPGMWSLT RPGPKLMVWL ICFIVFTYII YMLKLVSTSR  60
   61 SCDDSTSFTT VSALSTNVSS NVSSLSTSLA SRRRNWEEEE EDTVVDKLTD LNHVVFGIAA 120
  121 SSKLWKQRKE YIKIWYKQKR MRGYVWLDKE VKKSLSDDDD EKLLPPVKIS GGTASFPYTN 180
  181 KQGQRSALRI SRIVSETLRL GPKNVRWFVM GDDDTVFVID NLIRVLRKYD HEQMYYIGSL 240
  241 SESHLQNIFF SYGMAYGGGG FAISYPLAKA LSKMQDRCIQ RYPALYGSDD RMQACMAELG 300
  301 VPLTKELGFH QYDVYGNLFG LLAAHPVTPF VSMHHLDVVE PIFPNMTRVR ALKKITEPMK 360
  361 LDSAGLLQQS ICYDKHKSWT ISVSWGYAVQ IFRGIFSPRE MEMPSRTFLN WYKRADYTAY 420
  421 AFNTRPVSRN PCQKPFVFYM SSTKFDQQLN TTVSEYTIHR VSHPSCRWKM TNPAEINTIV 480
  481 VYKKPDPHLW ERSPRRNCCR VLQTKRNNTL WINVGVCRAG EVTEVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle