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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6456751
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGSVASLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL  60
   61 KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE IRNGSRILGM KKTLVYHKGR 120
  121 APRGEKTNWV MQEYRLSDED LKKAGVPQEA YVLCRIFQKS GTVPKNGEQY GAPYLEEEWE 180
  181 EDGMTYVPAQ DAFSEGLALN DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES 240
  241 GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD 300
  301 ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ 360
  361 DDFNFEDYLS FFDDEGLTFD ESLLMGPEDF LPNPETLEQK PAPKEMEKER GRRRQRSSGG 420
  421 KGKWRKIFFQ NKYTDFKDFD SAPKYPFLKK TSHMLGAIPT PSSFASQFQT KDAMRLHAAQ 480
  481 SSGSVHVTAG MMRISNMTLA ADSGMGWSYD KNGNLNVVLS FGVVQQDDAM TASGSKTGIT 540
  541 ATRAMLVFMC LWVLLLSVSF KIVTMVSAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle