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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6453713
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNLKLIIG SILISQAQAI WPFDSSGSSS SSDSSPSETG SSGGTFPFDL FGSGSSLTQS  60
   61 SSAQASSTKS TSDSASSTDS SLFSSSNSGS SWYQTFLDGD SGDQKTDYAP FNLTCPSKKT 120
  121 FIRTASELSQ QEKDYIHKRQ ETTNKNLIDF LSKRANLSDF DAKSFINDNA PNHNITIGLS 180
  181 FSGGGYRAML AGAGQILGLD GRYEDANKHG LGGLLDSSTY VVGLSGGNWL VGSLALNDWL 240
  241 SVGDIVNGKS TIWQLQDSIL NPSGMRIDKT IAYYYGLAQA VQAKEDAGFQ TSVTDTWGRA 300
  301 LSYQFFEEDD SGTGGANITW SSIRNLSSFQ DHSMPYPIVV ANGRTPGTYI INENSTIFEI 360
  361 SPYELGSWDP SLKSFSDIQY LGSSVNNGNP NNTDICVNNF DNAGFIMGTS SSLFNQILLQ 420
  421 LDNYSINSII KMILEKVLTD VSDEEYDIAV YEPNPFFGAD SAGIKSITTN DTLYLCDGGE 480
  481 DLQNVPFYPL IQNERGVDVI FAFDNSADTN SSWPNGTSIQ ETYKRQFSKQ GKGTPFPFAP 540
  541 DYKTFLDKNM GDKPVFFGCN SSDLEDLVAW HENDKINVTD VPLVVYTSNT RMSYNSNFST 600
  601 FKLSYSDQEK FGAIRNGFET VTRNNLTDDE NWSTCVGCAI IRRQQERLGE EQSDECKKCF 660
  661 QEYCWTGGFK DAASVSSVSG ISGLAAKTHT SGGTSSTTQQ TSTTTGSSAN GGSSSTGSSS 720
  721 SSKKKNGGDL VNGGVPSSIF LVFNSLLGLI IAYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle