YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15421148
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTVFALAVV VFTTFTTVVA TPSGCSASYD GPFQITVVKP STKRRDTTQS TCGQDGYLTL  60
   61 TLAQGQLTDA KGRVGYIASN YQFQFDAPPQ INADSVGGYS SCSNGSLALA ESSVFYQCLS 120
  121 GDFYNLYDRS WAEQCEPINI DILPCTSGAS TTDQPSAEVP VSQINDGQPQ ATSATTRVPA 180
  181 PVSQISDGQP QAPTQAPTRA PVSQISDGQP QAPSATPHNA TTSAMPTGKP TEKPSGIPVS 240
  241 QISDGQPQAP HATMKSSSAS YVSYTSTASQ SSATSPPITA GGNANDAGSI GAFIIAALGA 300
  301 AAFL

Type	Start	End	Confidence
Signal Peptide	1	27	0.95
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	304	0.98