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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4580679
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLANSCCGWR KYKTHDQHHR TLKKKTRQNT SDTTVHIEVN SNEIQFPGSY RFNLDSKKIN  60
   61 IGRMNILGHK RGNFRVTRYV TVTVLLILST AVNAYAQPEN KSFSNSSNND SPEMVMLSNE 120
  121 TNNSAKVLSE KNGSSSISAD DKINENMGIF QMKVQSKPGK KSTPLAKVSE HGDLSRVQSV 180
  181 SLYRNTLINI ESMLQRQLRE KAKVDSIESI KMHILMRLNL KKLPNITKPI SVPQNIIDNF 240
  241 YRDYNASSKT TVWNRMESID EFHLSINDTY GDHIMTDFFD ESSSSQMQGD DANTVNEFLI 300
  301 DLNKNQAKKS DIPINTNDEE YESILSHISS IYIFPEEIQP HVRHNRKVDV FRFQIDSSYS 360
  361 DLSYATLHLY LRGWDWISAH QPGLLEEIKK QPRKDIVVTI HRAIRVANTT SFNPKVKMFE 420
  421 FRHSIPSGLG QWVAVDLKSL LGNLGSNMTQ EILIKGAETW MKSLVVTTDN TSKNPLTVHI 480
  481 EIGSQKKHRR KRSVYMDCTE NDHDMRCCRY PLKVNFTSFG WHFVVAPTSF DAYFCSGDCK 540
  541 VGYLEQYPHT HLAALTTSAT PCCSPTKMSS LSLLYFDDNH NLVLSVIPNM SVEGCSCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle