YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29500899, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTLFLTL LFSASLIAIS SANFNQDFQI TWGDGRAKIL NNGELLTLSL DKASGSGFQS  60
   61 QNEYLFGKID MQLKLVAGNS AGTVTAYYLS SKGSTWDEID FEFLGNLSGD PYTLHTNVFS 120
  121 QGKGNREQQF HLWFDPTADF HTYSILWNPN RIIFSVDGTP IREFKNWESN GVPFPKDQPM 180
  181 RIYSSLWNAD DWATRGGLVK TDWTKAPFTA SYKNFKAEAC VWSGGKSSCS PSPAGSSNSW 240
  241 LSQEMDSASQ ERLKWVQKNY MIYNYCTDTK RFPQGLPTEC NLP

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	283	0.99