YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6015993
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFYWDLIMLL LMVGNLIVLP VGITFFKEEN SPPWIVFNVL SDTFFLLDLV LNFRTGIVVE  60
   61 EGAEILLAPR AIRTRYLRTW FLVDLISSIP VDYIFLVVEL EPRLDAEVYK TARALRIVRF 120
  121 TKILSLLRLL RLSRLIRYMH QWEEIFHMTY DLASAVVRIF NLIGMMLLL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.74
Transmembrane Helix	7	26	0.95
Non-Cytoplasmic	27	33	0.74
Transmembrane Helix	34	55	0.64
Cytoplasmic	56	75	0.78
Transmembrane Helix	76	96	0.65
Non-Cytoplasmic	97	146	0.64
Transmembrane Helix	147	168	0.61
Cytoplasmic	169	169	0.54