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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15291381
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEGKNLPHS SADVPFRSKE LRKQSLIQHT GLVGVIDEGT KTIGFSIYTT PDFKEIAAHR  60
   61 VELSVITPQD GWYEQDPLEM MASINKCAEE AIKQLPEQGF SASDIVTVGI TNQRETTIVW 120
  121 DAVTGKPLYN ALLWKDIRTS TTVEQIVAKV QDPNHFRSST GLPISTYFSA LKIRWLRDNV 180
  181 PEVRQAIRER RCKAGTVDSW IVWNLTNGAL HITDVTNASR TLLMNLETQA WDPVLLKTFG 240
  241 IREEMLPTIH SCSEIFGKIT SERSPLRGMT LSGIMGNQQA SLLGQMCVKP GQTKNTYRSG 300
  301 CFLLCNTGDK PVFSRHGLLT TVAYKLGPQA PTIYAIEGAV SVAGHALSWL QNKVRILPDS 360
  361 RDAEKYAEMV PTSGDVYFVP AFTGLYAPYW RQNARGIIIG LTQFTRKNHI VRAALESICF 420
  421 QTRDILECMH QECGYEINKL HADGKLTTNN LLMQLQADTI GMPVFRSQLM DSTAFGAAMC 480
  481 AAQADGVNLC QFEPEKRYYE NVHYDTFLAT TTYVERKERY GKWKRAVERS LGWVIKQKKT 540
  541 REYTEENYRM LSSLPASIFL ISSFAMLVHS LAASGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle