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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6010435
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIKKYHIR GRKNILIFLL KIFLFSPLIW ILIYSEYFTV VKNYNKIDNV YNIFEIRLKR  60
   61 SLAQVLGNTR LSSRGVRDPR TKEALKEKQF RDHKRKEALK QKTEKNEKAR NALKEKKLKE 120
  121 QKKNDAQKAK DLTKKESQDS SSEKSLKEKV NGEALKEKEN KETLKKKELE NQEEKEEKNK 180
  181 IKDNNDEALK NKGNDKDDKK IVPKKPESVE KDLKEMELKE KEFIKQHLKD YEERKEKRRN 240
  241 WILRSLRRDK LREIEQLEKL NAQLESAINE LKERRASRRP MMVKMQRGMK DEVDEWIKKY 300
  301 DDEQAEKNGT KDEEIKDKGD GYEEIVETKF YGMRENALGE LDEYEERYEK KRYYLKEDGE 360
  361 GDLKDVEEKL EETGYGFREK FPTTRILVKR KRNKEQKKLK EDKEKKLIAA EEPDDEKKIK 420
  421 LKDSDDKVVV PVNKNKSSFP DKFRAPDKKR TMFYRLSELF PIVPRKDNEL AVCGDSMDSK 480
  481 VNGKKLKSTF NPFKRRRNKL KERKMQELHK FKKNYKKYQK LLEREKRENP DGEPLNTPEI 540
  541 HVIRPSDLMD KGENKSAGHP FKYQPTKGLK EYEESHVSKD YQLEHEPPTK LPEYEKGHVS 600
  601 REYQLDHEPP TKLPEYEKGH VSREYQLDNE VRDELPEYEK GHVSREYQLD NEGPSTLKEY 660
  661 DQTELAKGKD ITNKPHESVD EYDQTELAKG KDITNKPHES VDEYDQSELA KGKDITNKPH 720
  721 ESVDEYDQTE LAKGKEVTNK PHENLEEYNE TDLAKGKEVT NKPHESVDEY DQSELAKGKD 780
  781 ITNKPHESVD EYDQTELAKG KEVTNKAREN LEEYNETDLA KGKEVTNKAR ENLEEYNETD 840
  841 LAKGKEVTNK AHENLEEYNE TDLAKGKEVT NKAHENLEEY NETDLAKGKE VTNKAHENLE 900
  901 EYNETDLAKG KEVTNKAREN LEEYNETDLA KGKEVTNKAR ENLEEYNETD LAKGKEVTNK 960
  961 ARENLEEYNE TDLAKGKEVT NKARENLEEY NETDLAKGKE VTNKARENLE EYNETDLAKG1020
 1021 KEVTNKAREN LEEYEEKDYM KNNELQNKGS DGLKENAELK NKELRNKGSD GLKENAELKN1080
 1081 KELRNKGSDG LKENAELKNK ELRNKGSEGL KENAELKNKE LRNKGSEGLK ENAELKNKEL1140
 1141 RNKGSEGLKE NAELKNKELQ NKGSEGLKEN AELKNKELQN KGSEGLKENA EQKNKELQNK1200
 1201 GSEGLKENAE LKNKELRNKG SDGLKENAEL KNKELRNKGS DGLKENAELK NKELRNKGSE1260
 1261 GLKENVYTNN DLKNNDIQNK DLSNKDMKNK ELLNKDISNK DMKNKELLNK DLSNEDMKNK1320
 1321 ELLNKDIRNK DLKSIGNMEQ QNTGLKNTPS KGQQNTGLKN TPNERQQNTG LKNTPSEGQQ1380
 1381 NTGLKNTPSE GQQNTGLKNT PNERQQNTGL KNTPSEGQQN TGLKNTPIEG QQNTGLKNTP1440
 1441 SEGQQNTGLK NAANKGQQNT GLKNAANKGQ QNTGLKNTPS KGQQNTGLKN TPNERQQNTG1500
 1501 LKNTPNERQQ NTGLKNTPSE GQQNNDLKNT PNERQQNTGL KNTASKGQQN TGLKNAPNER1560
 1561 QQNTGLKNTP SEGQQNTGLK NTPSEGQQNT GLKNTPNERQ QNTGLKNTAS KGQQNTGLKN1620
 1621 APNERQQNTG LKNTPSEGQQ NTGLKNSASK GQQNTGLKNT PSEGQQNNDL KNAPNERQQN1680
 1681 

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