YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5919198
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMYFFIGNLA LCDLLAGIAY KVNILMSGRK TFSLSPTVWF LREGSMFVAL GASTCSLLAI  60
   61 AIERHLTMIK MRPYDANKKH RVFLLIGMCW LIAFSLGALP ILGWNCLENF PDCSTILPLY 120
  121 SKKYIAFLIS IFTAILVTIV ILYARIYFLV KSSSRRVANH NSERSMALLR TVVIVVSVFI 180
  181 ACWSPLFILF LIDVACRAKE CSILFKSQWF IMLAVLNSAM NP

Type	Start	End	Confidence
Cytoplasmic	1	4	0.78
Transmembrane Helix	5	24	0.77
Non-Cytoplasmic	25	43	0.80
Transmembrane Helix	44	62	0.94
Cytoplasmic	63	81	0.90
Transmembrane Helix	82	104	0.93
Non-Cytoplasmic	105	124	0.96
Transmembrane Helix	125	147	0.96
Cytoplasmic	148	166	0.94
Transmembrane Helix	167	189	0.91
Non-Cytoplasmic	190	222	0.75