YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1929920
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWTLLFLAF LHHLTGSCAQ AVLAHRNSVS TSLGGTVKLS CTLSSGNIDS NYVHWYQQYE  60
   61 GRSPTTMIYN DDKRPDGVPD RFSGSIDSSS NSAFLTIKTV EIEDEASYFC HSYVSGMYLF 120
  121 GGGTTLTVLG QPKSTPTLTV FPPSTEELQG NKATLVCLIS DFFPSDVEVA WKANGAPISQ 180
  181 GVDTANPTKQ GNKYIASSFL RLTAEQWRSR NSFTCQVTHE GNTVEKSLSP AECV

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	234	0.99