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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14279690
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVITLQSS STTAPAASAA SFQPSDQLLR SRVQNQPLSN QSPLPFRLPH PLLALPRVPV  60
   61 PGRDGQSCDA CLRRKSRCAM NEMVNKCYSC DFHRQDCTFT LSVTSRPSTA EVQSKKRKLD 120
  121 DTVPEDVDSP KRLSTNPPVS KTNLARSPLN IQARITPGYW YQRTQHIGLT TDLEPALLEF 180
  181 LPLDQNHEGI IASSRVRKFG DDGTFMRMVN TLSHADSPQS ASLDAIESLV APYGSTLIDK 240
  241 FFEHIHPTFP ILMEDSFRHS YRARQGLSPL LLSAVYVLAL KFVDVGPASQ SVRRPDAARL 300
  301 ESTALKLLIE SLPYASISTI QAGVLLMEKS TIATHALNAQ LVTAGFELGL HQDCSGWRME 360
  361 TWEKGLRKRL AWALYMQDKW SALVHGRPSH IVSFNWTVQD LVEQDFAEAF PSHDSQDDDP 420
  421 VGHGPLYFCH MVALTTILSD ILDRFYTLRA IEEFKAAGGN RTRMILERAK PAQIRLKEWF 480
  481 GRLPAELKME SGGDLFEVIN EDNARNGALH LSYFATEITL HRCIVRSLSP DTADAYLSHI 540
  541 CRSAAKTRLI SAMDFVNRLR PPHLRSFWPA ASRTNFALIG SFGVLLRISS PTKEEAEFYR 600
  601 LRLCEYRWTL SVSKKNAEFM EFALDSLDNA NTLDQHVPEK PGIDELMTSA AKPTVTQPRP 660
  661 GTAAQLENTI LAMDQGNDSG RGGTSSVISG LASPATSVSE DSFHDTAIPP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle