YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2687653
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLPLRLFLII ANTMAFQNDV YEWARDHRAH HKFSETHADP HNSRRGFFFS HVGWLLVRKH  60
   61 PAVKEKGGKL DMSDLKAEKL VMFQRRYYKP GLLLMCFILP TLVPWYCWGE TFVNSLCVST 120
  121 FLRYAVVLNA TWLVNSAAHL YGYRPYDKNI SSRENILVSM GAVGEGFHNY HHAFPYDYSA 180
  181 SEYRWHINFT TFFIDCMALL GLAYDRKRVS KAA

Type	Start	End	Confidence
Cytoplasmic	1	86	0.98
Transmembrane Helix	87	108	0.88
Non-Cytoplasmic	109	120	0.81
Transmembrane Helix	121	143	0.73
Cytoplasmic	144	154	0.73
Transmembrane Helix	155	172	0.68
Non-Cytoplasmic	173	184	0.76
Transmembrane Helix	185	204	0.85
Cytoplasmic	205	213	0.91