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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9651945
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLFLFLFF QFLHFHFPKT LSAPISEYRA LLSLRSAITD ATPPLLTSWN SSTPYCSWLG  60
   61 VTCDNRRHVT SLDLTGLDLS GPLSADVAHL PFLSNLSLAS NKFSGPIPPS LSALSGLRFL 120
  121 NLSNNVFNET FPSELSRLQN LEVLDLYNNN MTGVLPLAVA QMQNLRHLHL GGNFFSGQIP 180
  181 PEYGRWQRLQ YLAVSGNELE GTIPPEIGNL SSLRELYIGY YNTYTGGIPP EIGNLSELVR 240
  241 LDAAYCGLSG EIPAALGKLQ KLDTLFLQVN ALSGSLTPEL GNLKSLKSMD LSNNMLSGEI 300
  301 PARFGELKNI TLLNLFRNKL HGAIPEFIGE LPALEVVQLW ENNFTGSIPE GLGKNGRLNL 360
  361 VDLSSNKLTG TLPTYLCSGN TLQTLITLGN FLFGPIPESL GSCESLTRIR MGENFLNGSI 420
  421 PRGLFGLPKL TQVELQDNYL SGEFPEVGSV AVNLGQITLS NNQLSGVLPP SIGNFSSVQK 480
  481 LILDGNMFTG RIPPQIGRLQ QLSKIDFSGN KFSGPIVPEI SQCKLLTFLD LSRNELSGDI 540
  541 PNEITGMRIL NYLNLSRNHL VGGIPSSISS MQSLTSVDFS YNNLSGLVPG TGQFSYFNYT 600
  601 SFLGNPDLCG PYLGACKDGV ANGAHQPHVK GLSSSFKLLL VVGLLLCSIA FAVAAIFKAR 660
  661 SLKKASGARA WKLTAFQRLD FTVDDVLHCL KEDNIIGKGG AGIVYKGAMP NGDHVAVKRL 720
  721 PAMSRGSSHD HGFNAEIQTL GRIRHRHIVR LLGFCSNHET NLLVYEYMPN GSLGEVLHGK 780
  781 KGGHLHWDTR YKIAVEAAKG LCYLHHDCSP LIVHRDVKSN NILLDSNHEA HVADFGLAKF 840
  841 LQDSGTSECM SAIAGSYGYI APEYAYTLKV DEKSDVYSFG VVLLELITGR KPVGEFGDGV 900
  901 DIVQWVRKMT DSNKEGVLKV LDPRLPSVPL HEVMHVFYVA MLCVEEQAVE RPTMREVVQI 960
  961 LTELPKPPDS KEGNLTITES SLSSSNALES PSSASKEDQN PPQSPPPDLL SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle