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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7158844
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIKLLVLS LACACVIAHS PIPPVSRTIF LDERLEGGAF ENIDAFNNIE LSNAAASPYR  60
   61 LPNTTIPTHY KVLWVIDIHQ TVQSYSGNVE ITLQATQPNV NEIVIHCDHL TVTSVVLRQG 120
  121 TATQGTVIPT TATAQSEYHF LRVALNDGVL SYNADVPVQY TLTIEFNALM RDDMYGIYRS 180
  181 WYRNLPTDTN IRWMATTQFQ ATAARYAFPC YDEPGFKAKF DVTIRRPTGY KSWFCTRQRV 240
  241 SRVSTVAGYE EDEYHTTPEM STYLLALIVA EYDSLEAVDD NNDVLHEVIA RPGAITNGQA 300
  301 IYAQRVGQEL LGNMSEHTGY DFFSQDVNLK MTQAAIPDFG AGAMENWGLL TYREAYLLYD 360
  361 EQHTSSNFKQ IIAYILSHEI AHMWFGNLVT NAWWDVLWLN EGFARYYQYF LTAWVEDMGL 420
  421 ATRFINEQVH ASLLSDSSIS AHPLTNPGVG SPASVSAMFS TITYNKGAAV IRMTEHLLGF 480
  481 EVHRAGLRTY LQNMQFKTVQ PIDLFTALQT AGHNAGALDA YGVEFNFVKY YESWTEQPGH 540
  541 PVLNVYINHR TGQMTIYQRR FDIDTGYSVQ NKNYIVPITF TTGANPNFDN TKPTHIISKA 600
  601 VTVIDRGVVG DVWTIFNIQQ TGFYRVNYDD YTWDLIIIAL RGADRERIHE YNRAQIVNDV 660
  661 FQFARAGLMK YDRALNILSY LENETDYAPW VAAMTGFNWL RNRLVGKPQL AELNARIVQW 720
  721 ASKVMSELTY APIEGEDFMR SYLRWQLAPV MCNLNVPACR AGASAIFNDL RVFGHEVPVD 780
  781 SRNWVYCNAL RDGGAQEFDF LYNRFKGHNV YTEKILILQT LGCTSHAASL TTLLNDIVTP 840
  841 NNIIRPQDYT TAFSTAVSGN EENTLFVFNY VQNNLQAVLN AFANPRTPLS YIAARLRTVE 900
  901 EVNTYQQWLN LTTTREALGT SYNSVYGDSV SAYNSILWVE TVQDSLTTYL TNGNDVIQST 960
  961 TSTTTTTPAP TTISLPAISE PSTPSLPEVT DGAMTSFASL FIISLGAILH LIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle