YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15080897, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLRCVPR VLGSAVPSLR AAAPASPFRQ LLTPGPRLCA RPFGLLSVRA GSERRPGLLR  60
   61 PRGPCACGCG CGLLHTEGDK AFVDFLNDEI KEERKIQKHK TLPKMSGGWE LELNGTEAKL 120
  121 MRKVAGEKIT VTFNINNSIP PTFDGEEEPT QGQKVEEQEP ELTSTPNFVV EVIKNDGKKA 180
  181 LVLDCHYPED EVGQEDEAES DIFSIREVSF QSSGESEWKD TNYTLNTDSL DWALYDHLMD 240
  241 FLADRGVDNT FADELVELST ALEHQEYISF LEDLKSFVKS Q

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	281	0.99