YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23305099
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYYNILL FSLPLNILEH NPWNHYMKPH TYTNRSLCEC ELYELANYDN DPQMTEVMEN  60
   61 FHLIQTQQRF HDYDDRMKEK RKQCKEDVIK KFQKIILKDK LENQMAHQLP TLDPNITTED 120
  121 IPTCICEKSL ADKVEKGCLR CGVVFGGGIA PSVGLLGGIG QVALSAWKTA AITSAKEAAE 180
  181 KAGIAAGKVA GDAAGMKVVI HGLQHFRVDK LFPDIFKNFV NTKPYTEVTN IASTINEKYR 240
  241 TTCLSLNRNF TAPTECIKFQ YNFGIFIKGS STPGPPGSTA IPNALNRLFG EAEKTAGAAA 300
  301 KIAKKSVTTG ITEQQTALIE SGFNSSITSI NASIFAIVVI VLIMVIIYLI LRYRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	329	0.87
Transmembrane Helix	330	351	0.93
Cytoplasmic	352	355	0.88