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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7489538, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGCDCIEPL WPTDELLIKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA  60
   61 FIVLCGATHL INLWTFTTHT KTVAMVMTVA KVSTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAEQLD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GGTLGLEECA 180
  181 LWMPSRSGSS LQLSHTLRHQ ITVGSTVSIN LPVVNQVFSS NRAIIIPHTS PLARIRPLAG 240
  241 RYVPPEVAAV RVPLLHLSNF QINDWPELSA KSYAIMVLML PSDSARKWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN 360
  361 AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL DLSKLEDGSL ELEIKAFNLH 420
  421 AVFKEVMSFI KPIAAIKRLS VSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI 480
  481 TLVASVVKAD SLREFRTPDF HPTASDDNFY LKVQIKDTGC GISPQDLPQV FTKFPQSQPG 540
  541 GNRGYSGSGL GLAICKRFVT LMGGHIWLDS EGTGRGCTVT FVIQLGICDN TNAYQQKLIP 600
  601 LVWPSSGDAD FVGPVPNAPN EEKGQASLKS RYQRSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle