YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15054388
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSKITLVLT LFSSYFISTD GSFPALLAFG DSILDTGNNN FLLTFMKGNI WPYGRSFSMR  60
   61 RATGRFGNGR VFSDIVAEGL GIKKILPAYR KLFNSPSDLR TGVCFASGGA GVDPVTSKLL 120
  121 RVLTPKDQVN DFKGYIRKLK ATAGPSRASS IVSNAVILVS QGNNDIGISY FGTPTAAFRG 180
  181 LTPNRYTTKL AGWNKQFMKE LYDQGARKFA VMGVIPLGCL PMTRIFLGGF VITCNFFANR 240
  241 VAEQYNGKLR SGTKSWGREA GFRGAKFVYV DMYNTLMDVI KNYRRYGFSN EKNGCCCMIT 300
  301 AIIPCPNPDK YVFYDFVHPS EKAYRTISKK LVQDIKNGLA

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	340	0.95